{
  "_id": "6a5350909b92047c28d57f2d",
  "Package": "spikeSlabGAM",
  "Version": "1.1-20",
  "Title": "Bayesian Variable Selection and Model Choice for Generalized\nAdditive Mixed Models",
  "Authors@R": "c(person(\"Fabian\", \"Scheipl\", role = c(\"aut\", \"cre\"),\nemail = \"fabian.scheipl@stat.uni-muenchen.de\"),\nperson(\"Bettina\", \"Gruen\", role = \"ctb\"))",
  "Description": "Bayesian variable selection, model choice, and regularized\nestimation for (spatial) generalized additive mixed regression\nmodels via stochastic search variable selection with\nspike-and-slab priors.",
  "License": "MIT + file LICENSE",
  "URL": "https://github.com/fabian-s/spikeSlabGAM",
  "Collate": "'utils.R' 'spikeAndSlab.R' 'terms.R' 'ssGAMDesign.R'\n'spikeSlabGAM.R' 'bugs.R' 'plot.R' 'predict.R' 'summary.R'",
  "RoxygenNote": "7.1.2",
  "VignetteBuilder": "knitr",
  "Repository": "https://fabian-s.r-universe.dev",
  "Date/Publication": "2024-10-22 13:41:59 UTC",
  "RemoteUrl": "https://github.com/fabian-s/spikeslabgam",
  "RemoteRef": "HEAD",
  "RemoteSha": "a4e41f293d54cf81499c0c109c91b6545527ce2c",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-07-12 08:25:11 UTC",
    "User": "root"
  },
  "Author": "Fabian Scheipl [aut, cre],\nBettina Gruen [ctb]",
  "Maintainer": "Fabian Scheipl <fabian.scheipl@stat.uni-muenchen.de>",
  "_user": "fabian-s",
  "_type": "src",
  "_file": "spikeSlabGAM_1.1-20.tar.gz",
  "_fileid": "https://r2.ropensci.org/40a7bf269440fabdf3ecc2ece0a56ade7dec3990270ef12f5a71657e1328ddb9",
  "_filesize": 1449583,
  "_sha256": "40a7bf269440fabdf3ecc2ece0a56ade7dec3990270ef12f5a71657e1328ddb9",
  "_expires": "2026-10-20T08:30:06.000Z",
  "_created": "2026-07-12T08:25:11.000Z",
  "_published": "2026-07-12T08:30:07.910Z",
  "_jobs": [
    {
      "job": 86631618927,
      "time": 166,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8257980654"
    },
    {
      "job": 86631618958,
      "time": 197,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8257984657"
    },
    {
      "job": 86631618907,
      "time": 205,
      "config": "linux-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8257986014"
    },
    {
      "job": 86631618905,
      "time": 173,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8257981386"
    },
    {
      "job": 86631618933,
      "time": 91,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8257970370"
    },
    {
      "job": 86631618934,
      "time": 219,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8257987631"
    },
    {
      "job": 86631618924,
      "time": 147,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8257977768"
    },
    {
      "job": 86631618930,
      "time": 251,
      "config": "macos-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8257992061"
    },
    {
      "job": 86631368326,
      "time": 209,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8257958026"
    },
    {
      "job": 86631618910,
      "time": 111,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8257972807"
    },
    {
      "job": 86631618923,
      "time": 130,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8257975540"
    },
    {
      "job": 86631618909,
      "time": 137,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8257976473"
    },
    {
      "job": 86631618916,
      "time": 127,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8257975330"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/fabian-s/actions/runs/29185724288",
  "_status": "success",
  "_upstream": "https://github.com/fabian-s/spikeslabgam",
  "_commit": {
    "id": "a4e41f293d54cf81499c0c109c91b6545527ce2c",
    "author": "fabian-s <fabian.scheipl@gmail.com>",
    "committer": "fabian-s <fabian.scheipl@gmail.com>",
    "message": "..\n",
    "time": 1729604519
  },
  "_maintainer": {
    "name": "Fabian Scheipl",
    "email": "fabian.scheipl@stat.uni-muenchen.de",
    "login": "fabian-s",
    "description": "",
    "uuid": 998541
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 2.15.1",
      "role": "Depends"
    },
    {
      "package": "coda",
      "role": "Imports"
    },
    {
      "package": "cluster",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "version": ">= 2.0.0",
      "role": "Imports"
    },
    {
      "package": "gridExtra",
      "version": ">= 2.0.0",
      "role": "Imports"
    },
    {
      "package": "interp",
      "role": "Imports"
    },
    {
      "package": "MASS",
      "role": "Imports"
    },
    {
      "package": "MCMCpack",
      "role": "Imports"
    },
    {
      "package": "mvtnorm",
      "role": "Imports"
    },
    {
      "package": "R2WinBUGS",
      "role": "Imports"
    },
    {
      "package": "reshape",
      "role": "Imports"
    },
    {
      "package": "scales",
      "role": "Imports"
    },
    {
      "package": "splines",
      "role": "Imports"
    },
    {
      "package": "parallel",
      "role": "Imports"
    },
    {
      "package": "mboost",
      "role": "Suggests"
    },
    {
      "package": "mlbench",
      "role": "Suggests"
    },
    {
      "package": "gtable",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "fabian-s",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 14,
  "_contributors": [
    {
      "user": "fabian-s",
      "count": 42,
      "uuid": 998541
    }
  ],
  "_userbio": {
    "uuid": 998541,
    "type": "user",
    "name": "Fabian Scheipl",
    "followers": 138
  },
  "_downloads": {
    "count": 718,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/spikeSlabGAM"
  },
  "_mentions": 3,
  "_devurl": "https://github.com/fabian-s/spikeslabgam",
  "_searchresults": 25,
  "_topics": [
    "openblas"
  ],
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "extra/spikeSlabGAM.html",
    "LICENSE",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/fabian-s/spikeslabgam",
  "_realowner": "fabian-s",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.9-6",
      "date": "2011-04-26"
    },
    {
      "version": "1.0-0",
      "date": "2011-09-07"
    },
    {
      "version": "1.1-0",
      "date": "2012-03-13"
    },
    {
      "version": "1.1-2",
      "date": "2012-09-17"
    },
    {
      "version": "1.1-3",
      "date": "2012-09-24"
    },
    {
      "version": "1.1-5",
      "date": "2013-03-13"
    },
    {
      "version": "1.1-6",
      "date": "2013-06-12"
    },
    {
      "version": "1.1-7",
      "date": "2014-02-24"
    },
    {
      "version": "1.1-8",
      "date": "2014-12-04"
    },
    {
      "version": "1.1-9",
      "date": "2015-07-23"
    },
    {
      "version": "1.1-11",
      "date": "2016-02-29"
    },
    {
      "version": "1.1-14",
      "date": "2018-09-17"
    },
    {
      "version": "1.1-15",
      "date": "2020-02-21"
    },
    {
      "version": "1.1-18",
      "date": "2022-05-30"
    },
    {
      "version": "1.1-19",
      "date": "2022-06-10"
    },
    {
      "version": "1.1-20",
      "date": "2024-10-22"
    }
  ],
  "_exports": [
    "evalTerm",
    "fct",
    "getPosteriorTerm",
    "lin",
    "mrf",
    "plotTerm",
    "rnd",
    "sm",
    "spikeAndSlab",
    "spikeSlabGAM",
    "srf",
    "ssGAM2Bugs",
    "ssGAMDesign",
    "u"
  ],
  "_help": [
    {
      "page": "evalTerm",
      "title": "Get summaries of the posterior (predictive) distribution of the linear predictor of a model term",
      "topics": [
        "evalTerm"
      ]
    },
    {
      "page": "fct",
      "title": "Generate design for a factor covariate",
      "topics": [
        "fct"
      ]
    },
    {
      "page": "getPosteriorTerm",
      "title": "Get the posterior distribution of the linear predictor of a model term",
      "topics": [
        "getPosteriorTerm"
      ]
    },
    {
      "page": "lin",
      "title": "Generate orthogonal polynomial base for a numeric covariate without intercept",
      "topics": [
        "lin"
      ]
    },
    {
      "page": "mrf",
      "title": "Generate design for a 2-D Gaussian Markov Random Field",
      "topics": [
        "mrf"
      ]
    },
    {
      "page": "plot.spikeSlabGAM",
      "title": "Generates graphical summaries of a fitted model",
      "topics": [
        "plot.spikeSlabGAM"
      ]
    },
    {
      "page": "plotTerm",
      "title": "Plot the estimated effect of a model term.",
      "topics": [
        "plotTerm"
      ]
    },
    {
      "page": "predict.spikeSlabGAM",
      "title": "Obtain posterior predictive/credible intervals from a spike-and-slab model",
      "topics": [
        "predict.spikeSlabGAM"
      ]
    },
    {
      "page": "print.summary.spikeSlabGAM",
      "title": "Print summary for posterior of a 'spikeSlabGAM' fit",
      "topics": [
        "print.summary.spikeSlabGAM"
      ]
    },
    {
      "page": "rnd",
      "title": "Generate design for a random intercept",
      "topics": [
        "rnd"
      ]
    },
    {
      "page": "sm",
      "title": "Generate a reparameterized P-spline base",
      "topics": [
        "sm"
      ]
    },
    {
      "page": "spikeAndSlab",
      "title": "Set up and sample a spike-and-slab prior model.",
      "topics": [
        "spikeAndSlab"
      ]
    },
    {
      "page": "spikeSlabGAM",
      "title": "Generate posterior samples for a GAMM with spike-and-slab priors",
      "topics": [
        "spikeSlabGAM"
      ]
    },
    {
      "page": "srf",
      "title": "Generate design for penalized surface estimation.",
      "topics": [
        "srf"
      ]
    },
    {
      "page": "ssGAM2Bugs",
      "title": "Convert samples from a model fitted with 'spikeSlabGAM' into a 'bugs'-object",
      "topics": [
        "ssGAM2Bugs"
      ]
    },
    {
      "page": "ssGAMDesign",
      "title": "Generate design and model information for 'spikeSlabGAM'",
      "topics": [
        "ssGAMDesign"
      ]
    },
    {
      "page": "summary.spikeSlabGAM",
      "title": "Summary for posterior of a 'spikeSlabGAM' fit",
      "topics": [
        "summary.spikeSlabGAM"
      ]
    },
    {
      "page": "u",
      "title": "Generate design for an always included covariate",
      "topics": [
        "u"
      ]
    }
  ],
  "_readme": "https://github.com/fabian-s/spikeslabgam/raw/HEAD/README.md",
  "_rundeps": [
    "boot",
    "cli",
    "cluster",
    "coda",
    "cpp11",
    "deldir",
    "farver",
    "ggplot2",
    "glue",
    "gridExtra",
    "gtable",
    "interp",
    "isoband",
    "labeling",
    "lattice",
    "lifecycle",
    "MASS",
    "Matrix",
    "MatrixModels",
    "mcmc",
    "MCMCpack",
    "mvtnorm",
    "plyr",
    "quantreg",
    "R2WinBUGS",
    "R6",
    "RColorBrewer",
    "Rcpp",
    "RcppEigen",
    "reshape",
    "rlang",
    "S7",
    "scales",
    "SparseM",
    "survival",
    "vctrs",
    "viridisLite",
    "withr"
  ],
  "_sysdeps": [
    {
      "shlib": "liblapack",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.32+ds-5",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libblas",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.32+ds-5",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    }
  ],
  "_vignettes": [
    {
      "source": "UsingSpikeSlabGAM-wrapper.Rnw",
      "filename": "UsingSpikeSlabGAM-wrapper.pdf",
      "title": "spikeSlabGAM: Bayesian Variable Selection, Model Choice and Regularization for Generalized Additive Mixed Models in R",
      "engine": "utils::Sweave",
      "headings": [],
      "created": "2022-05-27 16:01:17",
      "modified": "2022-05-27 16:01:17",
      "commits": 1
    }
  ],
  "_score": 5.720159303405957,
  "_indexed": true,
  "_nocasepkg": "spikeslabgam",
  "_universes": [
    "fabian-s"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.1-20",
      "date": "2026-07-12T08:27:48.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "a4e41f293d54cf81499c0c109c91b6545527ce2c",
      "fileid": "https://r2.ropensci.org/6d8289b55c47bebf78fc3a963bb7f461fde23a0a5f50988db69a3929559073a8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/fabian-s/actions/runs/29185724288"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.1-20",
      "date": "2026-07-12T08:28:11.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "a4e41f293d54cf81499c0c109c91b6545527ce2c",
      "fileid": "https://r2.ropensci.org/24baaccbbc0410d8f504cedd2175b6781694047bf92b93183abcb37c9fe96815",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/fabian-s/actions/runs/29185724288"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.1-20",
      "date": "2026-07-12T08:28:24.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "a4e41f293d54cf81499c0c109c91b6545527ce2c",
      "fileid": "https://r2.ropensci.org/56a9773a954c10d4970014b506dd6d9bef365ef3d93922a3144e9f7adee2ebdd",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/fabian-s/actions/runs/29185724288"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.1-20",
      "date": "2026-07-12T08:27:50.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "a4e41f293d54cf81499c0c109c91b6545527ce2c",
      "fileid": "https://r2.ropensci.org/0bb25f6249a5c1bfff934b8fb43999bee282e40f91215e3e0194387dae26d25f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/fabian-s/actions/runs/29185724288"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.1-20",
      "date": "2026-07-12T08:26:39.000Z",
      "arch": "aarch64",
      "commit": "a4e41f293d54cf81499c0c109c91b6545527ce2c",
      "fileid": "https://r2.ropensci.org/c4d937510638431fdd124374b0bb48463f2c645aec23521462d9eeb20826b4ff",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/fabian-s/actions/runs/29185724288"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.1-20",
      "date": "2026-07-12T08:28:03.000Z",
      "arch": "x86_64",
      "commit": "a4e41f293d54cf81499c0c109c91b6545527ce2c",
      "fileid": "https://r2.ropensci.org/07f15849b7a7c722554bce8b6135b4deab38c91a51f68ee19772887145567bfd",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/fabian-s/actions/runs/29185724288"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.1-20",
      "date": "2026-07-12T08:27:13.000Z",
      "arch": "aarch64",
      "commit": "a4e41f293d54cf81499c0c109c91b6545527ce2c",
      "fileid": "https://r2.ropensci.org/ff31d4656cb2b6b196237aea393d4152127e769cfd48bf875ba9272ed7ff216c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/fabian-s/actions/runs/29185724288"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.1-20",
      "date": "2026-07-12T08:28:34.000Z",
      "arch": "x86_64",
      "commit": "a4e41f293d54cf81499c0c109c91b6545527ce2c",
      "fileid": "https://r2.ropensci.org/2b32f2ebd96e840dd63cb64fe7477d8506a892392d7b4a451b8f5e73201137e0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/fabian-s/actions/runs/29185724288"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.1-20",
      "date": "2026-07-12T08:27:23.000Z",
      "arch": "emscripten",
      "commit": "a4e41f293d54cf81499c0c109c91b6545527ce2c",
      "fileid": "https://r2.ropensci.org/2b2bce06d9bb0e8a456d9c350f656f755f8aef0e9f6497ad957272dfa6391663",
      "status": "success",
      "buildurl": "https://github.com/r-universe/fabian-s/actions/runs/29185724288"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.1-20",
      "date": "2026-07-12T08:26:53.000Z",
      "arch": "x86_64",
      "commit": "a4e41f293d54cf81499c0c109c91b6545527ce2c",
      "fileid": "https://r2.ropensci.org/e8c41ec16c2b7fd3cdc75befb9b8058d64a15462c7849330de2a02c6e54902ba",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/fabian-s/actions/runs/29185724288"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.1-20",
      "date": "2026-07-12T08:26:55.000Z",
      "arch": "x86_64",
      "commit": "a4e41f293d54cf81499c0c109c91b6545527ce2c",
      "fileid": "https://r2.ropensci.org/19e3f8dc6471f8d1d9490709bfd9af22b205648bfeb04509c508ca32ebe4d2ab",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/fabian-s/actions/runs/29185724288"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.1-20",
      "date": "2026-07-12T08:26:51.000Z",
      "arch": "x86_64",
      "commit": "a4e41f293d54cf81499c0c109c91b6545527ce2c",
      "fileid": "https://r2.ropensci.org/d6520509e425da78273d73cb084188d18994c24156192ea3cf37fc18441a0481",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/fabian-s/actions/runs/29185724288"
    }
  ]
}